Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 AC106028.4-201ENST00000614509 607 ntBASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC85AQ96PX6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 AC093028.1-201ENST00000622998 982 ntBASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC85AQ96PX6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 AL139400.1-201ENST00000366220 510 ntBASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 AC004461.1-201ENST00000412461 403 ntBASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 SLC25A6P5-201ENST00000435663 894 ntBASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC85AQ96PX6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 PON3-203ENST00000427422 894 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 RFPL4AP1-201ENST00000530883 850 ntBASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 AC105339.1-204ENST00000636249 355 ntBASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC85AQ96PX6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms