Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 AC092364.2-202ENST00000597012 1073 ntBASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.48■□□□□ 0.71
SYNGAP1Q96PV0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 AC023141.5-201ENST00000458585 616 ntBASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 AC004449.1-201ENST00000564240 433 ntBASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 AL139327.4-201ENST00000612362 153 ntBASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNGAP1Q96PV0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 AC002056.1-201ENST00000395613 760 ntBASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 SPCS2P1-201ENST00000561636 679 ntBASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNGAP1Q96PV0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 AC025678.2-201ENST00000562061 970 ntBASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SYNGAP1Q96PV0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNGAP1Q96PV0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms