Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC009947.1-201ENST00000444350 727 ntBASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 IGHV3-65-201ENST00000523210 341 ntBASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC106730.1-201ENST00000566722 1090 ntBASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.71■□□□□ 0.43
RPRD1AQ96P16 AC106820.2-201ENST00000563775 3264 ntBASIC17.71■□□□□ 0.42
RPRD1AQ96P16 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.71■□□□□ 0.42
RPRD1AQ96P16 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RPRD1AQ96P16 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RPRD1AQ96P16 AC139713.2-201ENST00000641328 2723 ntBASIC17.71■□□□□ 0.42
RPRD1AQ96P16 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 EGFEM1P-202ENST00000431685 1563 ntBASIC17.7■□□□□ 0.42
RPRD1AQ96P16 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 AC108073.2-201ENST00000464002 357 ntBASIC17.7■□□□□ 0.42
RPRD1AQ96P16 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RPRD1AQ96P16 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
RPRD1AQ96P16 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 SLC25A1P3-201ENST00000395415 828 ntBASIC17.69■□□□□ 0.42
RPRD1AQ96P16 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 AC034105.1-201ENST00000563488 319 ntBASIC17.69■□□□□ 0.42
RPRD1AQ96P16 GGTLC5P-201ENST00000617623 998 ntBASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RPRD1AQ96P16 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RPRD1AQ96P16 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms