Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 AL022326.1-202ENST00000641533 845 ntBASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK5RAP3Q96JB5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SLC25A1P3-201ENST00000395415 828 ntBASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 ACTG1P4-201ENST00000425123 1122 ntBASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK5RAP3Q96JB5 LINC02012-201ENST00000608206 1725 ntBASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CDK5RAP3Q96JB5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 AKR1C7P-201ENST00000305623 895 ntBASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 FGFR3P6-201ENST00000457012 610 ntBASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 EGFEM1P-202ENST00000431685 1563 ntBASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.39■□□□□ 0.69
CDK5RAP3Q96JB5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDK5RAP3Q96JB5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms