Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHMP6Q96FZ7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 WWOX-216ENST00000569818 525 ntBASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 AP005242.2-201ENST00000580065 1175 ntBASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHMP6Q96FZ7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 CCR12P-201ENST00000446203 998 ntBASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 AL355075.4-201ENST00000554988 638 ntBASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 AC010240.3-201ENST00000607688 395 ntBASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHMP6Q96FZ7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHMP6Q96FZ7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms