Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 FLJ13224-201ENST00000313737 1514 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.8□□□□□ -0.36
RNF183Q96D59 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 RPS2P1-201ENST00000434010 821 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.8□□□□□ -0.36
RNF183Q96D59 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.8□□□□□ -0.36
RNF183Q96D59 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.8□□□□□ -0.36
RNF183Q96D59 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
RNF183Q96D59 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.8□□□□□ -0.36
RNF183Q96D59 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
RNF183Q96D59 AC025062.2-201ENST00000605477 670 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 MIR7706-201ENST00000613747 67 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.8□□□□□ -0.36
RNF183Q96D59 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.8□□□□□ -0.36
RNF183Q96D59 AC073592.4-201ENST00000623827 446 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 AC073592.5-201ENST00000624854 528 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 AL022326.1-202ENST00000641533 845 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 HLA-J-201ENST00000462773 1622 ntBASIC12.8□□□□□ -0.36
RNF183Q96D59 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RNF183Q96D59 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RNF183Q96D59 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
RNF183Q96D59 SIGLEC16-201ENST00000599858 1437 ntBASIC12.79□□□□□ -0.36
RNF183Q96D59 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 LINC00554-201ENST00000564841 3011 ntBASIC12.79□□□□□ -0.36
RNF183Q96D59 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.79□□□□□ -0.36
RNF183Q96D59 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.79□□□□□ -0.36
RNF183Q96D59 PRYP5-201ENST00000451909 266 ntBASIC12.79□□□□□ -0.36
RNF183Q96D59 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.79□□□□□ -0.36
RNF183Q96D59 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 AC243591.1-201ENST00000452967 1364 ntBASIC12.79□□□□□ -0.36
RNF183Q96D59 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC12.79□□□□□ -0.36
RNF183Q96D59 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.79□□□□□ -0.36
RNF183Q96D59 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RNF183Q96D59 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 AL353593.2-201ENST00000602529 1483 ntBASIC12.78□□□□□ -0.36
RNF183Q96D59 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RNF183Q96D59 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms