Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 BX005266.1-201ENST00000473402 457 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AC105339.3-201ENST00000560043 636 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AF228730.7-201ENST00000641842 219 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AC139713.2-201ENST00000641328 2723 ntBASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SH3KBP1Q96B97 AL049757.1-201ENST00000616842 1596 ntBASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 MYCLP1-201ENST00000372451 1075 ntBASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 AC006557.2-201ENST00000592985 1240 ntBASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 AL049840.3-201ENST00000602669 611 ntBASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
SH3KBP1Q96B97 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 KLF4P1-201ENST00000412782 1185 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 SIGLEC30P-201ENST00000455569 941 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 RPL13AP23-201ENST00000480739 586 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC106730.1-201ENST00000566722 1090 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC109462.3-201ENST00000573934 613 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 AC117500.6-201ENST00000624871 588 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 PGM5P2-202ENST00000637225 1043 ntBASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.05■□□□□ 0.32
SH3KBP1Q96B97 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
SH3KBP1Q96B97 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms