Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SMARCE1Q969G3 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.41■□□□□ 0.7
SMARCE1Q969G3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 AC124947.2-201ENST00000547118 1133 ntBASIC19.4■□□□□ 0.7
SMARCE1Q969G3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 PCDH8P1-201ENST00000428983 2773 ntBASIC19.4■□□□□ 0.7
SMARCE1Q969G3 AL353593.2-201ENST00000602529 1483 ntBASIC19.4■□□□□ 0.7
SMARCE1Q969G3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.4■□□□□ 0.7
SMARCE1Q969G3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.39■□□□□ 0.7
SMARCE1Q969G3 AC092068.3-201ENST00000587894 2016 ntBASIC19.39■□□□□ 0.69
SMARCE1Q969G3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 AC009533.2-201ENST00000543664 586 ntBASIC19.39■□□□□ 0.69
SMARCE1Q969G3 UBALD1-205ENST00000590891 2641 ntBASIC19.39■□□□□ 0.69
SMARCE1Q969G3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 EGFEM1P-202ENST00000431685 1563 ntBASIC19.39■□□□□ 0.69
SMARCE1Q969G3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMARCE1Q969G3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 VENTXP7-201ENST00000475503 772 ntBASIC19.38■□□□□ 0.69
SMARCE1Q969G3 AC091607.1-201ENST00000490318 1060 ntBASIC19.38■□□□□ 0.69
SMARCE1Q969G3 STK19B-204ENST00000512515 211 ntBASIC19.38■□□□□ 0.69
SMARCE1Q969G3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMARCE1Q969G3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMARCE1Q969G3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms