Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC026471.1-201ENST00000564629 3026 ntBASIC17.05■□□□□ 0.32
SCAMP4Q969E2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 PAWRP1-201ENST00000451083 565 ntBASIC17.04■□□□□ 0.32
SCAMP4Q969E2 POLD2P1-201ENST00000511220 997 ntBASIC17.04■□□□□ 0.32
SCAMP4Q969E2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 OR7E47P-204ENST00000575924 449 ntBASIC17.04■□□□□ 0.32
SCAMP4Q969E2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 AC140113.2-201ENST00000604370 208 ntBASIC17.04■□□□□ 0.32
SCAMP4Q969E2 GGTLC5P-201ENST00000617623 998 ntBASIC17.04■□□□□ 0.32
SCAMP4Q969E2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCAMP4Q969E2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 AC012313.1-201ENST00000593393 3059 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 PMS2P1-201ENST00000431037 1228 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 KRT18P58-201ENST00000527480 1120 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 AC027601.4-201ENST00000611259 610 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 LETM1P2-201ENST00000597330 2178 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.03■□□□□ 0.32
SCAMP4Q969E2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SCAMP4Q969E2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 AC092053.1-201ENST00000605787 1936 ntBASIC17.02■□□□□ 0.32
SCAMP4Q969E2 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.02■□□□□ 0.32
SCAMP4Q969E2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 MRPL20P1-201ENST00000400819 433 ntBASIC17.02■□□□□ 0.32
SCAMP4Q969E2 MED15P5-201ENST00000423150 992 ntBASIC17.02■□□□□ 0.32
SCAMP4Q969E2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 VN2R19P-201ENST00000442399 1052 ntBASIC17.02■□□□□ 0.32
SCAMP4Q969E2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCAMP4Q969E2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCAMP4Q969E2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms