Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.79□□□□□ -0.04
USP9XQ93008 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.79□□□□□ -0.04
USP9XQ93008 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
USP9XQ93008 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
USP9XQ93008 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.79□□□□□ -0.04
USP9XQ93008 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.79□□□□□ -0.04
USP9XQ93008 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
USP9XQ93008 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.79□□□□□ -0.04
USP9XQ93008 AC105233.2-201ENST00000523697 349 ntBASIC14.79□□□□□ -0.04
USP9XQ93008 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
USP9XQ93008 AF228730.5-201ENST00000530288 346 ntBASIC14.79□□□□□ -0.04
USP9XQ93008 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.79□□□□□ -0.04
USP9XQ93008 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 AC073592.3-201ENST00000625118 1834 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.78□□□□□ -0.04
USP9XQ93008 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
USP9XQ93008 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 BANF1P1-201ENST00000553684 263 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.78□□□□□ -0.04
USP9XQ93008 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.78□□□□□ -0.04
USP9XQ93008 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 AP000997.3-201ENST00000623333 2250 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
USP9XQ93008 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC14.78□□□□□ -0.04
USP9XQ93008 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.78□□□□□ -0.04
USP9XQ93008 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 AL020996.1-203ENST00000536896 2307 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 FXNP2-201ENST00000411625 547 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 AC098850.1-201ENST00000419919 790 ntBASIC14.78□□□□□ -0.04
USP9XQ93008 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.78□□□□□ -0.04
USP9XQ93008 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.78□□□□□ -0.04
USP9XQ93008 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
USP9XQ93008 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
USP9XQ93008 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.77□□□□□ -0.04
USP9XQ93008 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.77□□□□□ -0.04
USP9XQ93008 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
USP9XQ93008 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
USP9XQ93008 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
USP9XQ93008 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.77□□□□□ -0.04
USP9XQ93008 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
USP9XQ93008 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.77□□□□□ -0.05
USP9XQ93008 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.77□□□□□ -0.05
USP9XQ93008 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
USP9XQ93008 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
USP9XQ93008 AC087499.6-201ENST00000411576 835 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms