Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.35■□□□□ 0.69
USP6NLQ92738 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 GAPDHP21-201ENST00000450301 1010 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 HLA-J-202ENST00000469281 1241 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.35■□□□□ 0.69
USP6NLQ92738 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.35■□□□□ 0.69
USP6NLQ92738 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.35■□□□□ 0.69
USP6NLQ92738 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.35■□□□□ 0.69
USP6NLQ92738 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 AC005412.3-201ENST00000580309 715 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 AL158211.3-201ENST00000607385 239 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 BICD1-207ENST00000551848 1962 ntBASIC19.35■□□□□ 0.69
USP6NLQ92738 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
USP6NLQ92738 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP6NLQ92738 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.35■□□□□ 0.69
USP6NLQ92738 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
USP6NLQ92738 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6NLQ92738 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
USP6NLQ92738 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
USP6NLQ92738 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6NLQ92738 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
USP6NLQ92738 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.34■□□□□ 0.69
USP6NLQ92738 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP6NLQ92738 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 AC097493.3-201ENST00000509725 367 ntBASIC19.34■□□□□ 0.69
USP6NLQ92738 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6NLQ92738 LINC01451-201ENST00000623792 534 ntBASIC19.34■□□□□ 0.69
USP6NLQ92738 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.34■□□□□ 0.69
USP6NLQ92738 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
USP6NLQ92738 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.34■□□□□ 0.69
USP6NLQ92738 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP6NLQ92738 AC007613.1-201ENST00000572811 2597 ntBASIC19.34■□□□□ 0.69
USP6NLQ92738 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
USP6NLQ92738 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
USP6NLQ92738 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
USP6NLQ92738 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
USP6NLQ92738 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.33■□□□□ 0.69
USP6NLQ92738 AC104581.1-202ENST00000635932 2618 ntBASIC19.33■□□□□ 0.69
USP6NLQ92738 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
USP6NLQ92738 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.33■□□□□ 0.69
USP6NLQ92738 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP6NLQ92738 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
USP6NLQ92738 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 IGHV3-62-201ENST00000520057 340 ntBASIC19.33■□□□□ 0.68
USP6NLQ92738 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USP6NLQ92738 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.33■□□□□ 0.68
USP6NLQ92738 AL390754.1-201ENST00000619088 582 ntBASIC19.33■□□□□ 0.68
USP6NLQ92738 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 AC135050.7-201ENST00000624508 2218 ntBASIC19.33■□□□□ 0.68
USP6NLQ92738 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP6NLQ92738 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.33■□□□□ 0.68
USP6NLQ92738 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USP6NLQ92738 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP6NLQ92738 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
USP6NLQ92738 UXT-AS1-201ENST00000590504 1525 ntBASIC19.32■□□□□ 0.68
USP6NLQ92738 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP6NLQ92738 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms