Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ALMS1Q8TCU4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
ALMS1Q8TCU4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
ALMS1Q8TCU4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC087499.6-201ENST00000411576 835 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AL133215.2-201ENST00000609242 977 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC007431.3-201ENST00000623221 587 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 DOC2GP-202ENST00000514950 1163 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC098850.1-201ENST00000419919 790 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC044860.1-202ENST00000559481 777 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 AC105021.1-202ENST00000570572 669 ntBASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
ALMS1Q8TCU4 FAM220BP-201ENST00000377689 816 ntBASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms