Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNIP1Q8TAD8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SPDYE7P-202ENST00000420373 878 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 RBPMS2P1-201ENST00000437762 623 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 AL512638.1-201ENST00000457493 794 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 AL135744.1-201ENST00000565098 629 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 RARRES2P8-201ENST00000566335 367 ntBASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNIP1Q8TAD8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNIP1Q8TAD8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNIP1Q8TAD8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms