Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 AC134684.3-201ENST00000641758 218 ntBASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.92■□□□□ 0.78
NEDD1Q8NHV4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AC092919.2-201ENST00000623631 1645 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AC004967.1-201ENST00000453589 447 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AL031432.2-201ENST00000566714 459 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AL928711.1-201ENST00000570165 459 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 MIR4469-201ENST00000583919 79 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 AL353732.1-201ENST00000569618 1459 ntBASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.91■□□□□ 0.78
NEDD1Q8NHV4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 HMGA1P7-201ENST00000406908 502 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 AC211486.1-202ENST00000416371 468 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 FAM58CP-201ENST00000435741 640 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 AC211476.1-201ENST00000503899 468 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 AC091812.2-201ENST00000619081 385 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 ELL2P1-201ENST00000413990 1906 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 AC092053.1-201ENST00000605787 1936 ntBASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEDD1Q8NHV4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NEDD1Q8NHV4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
NEDD1Q8NHV4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AL023806.1-201ENST00000603994 1649 ntBASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AC092902.6-201ENST00000641783 218 ntBASIC19.89■□□□□ 0.77
NEDD1Q8NHV4 AC139713.2-201ENST00000641328 2723 ntBASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms