Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BEST2Q8NFU1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST2Q8NFU1 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 IGLL3P-201ENST00000412472 434 ntBASIC18.43■□□□□ 0.54
BEST2Q8NFU1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 KRT18P2-201ENST00000447938 1258 ntBASIC18.43■□□□□ 0.54
BEST2Q8NFU1 SLC25A6P2-201ENST00000497974 877 ntBASIC18.43■□□□□ 0.54
BEST2Q8NFU1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
BEST2Q8NFU1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 MIR1233-2-201ENST00000408138 82 ntBASIC18.42■□□□□ 0.54
BEST2Q8NFU1 MIR1233-1-201ENST00000408722 82 ntBASIC18.42■□□□□ 0.54
BEST2Q8NFU1 AC004832.2-201ENST00000426397 482 ntBASIC18.42■□□□□ 0.54
BEST2Q8NFU1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 AC096734.2-201ENST00000562054 433 ntBASIC18.42■□□□□ 0.54
BEST2Q8NFU1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
BEST2Q8NFU1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 YBX2P1-201ENST00000394192 760 ntBASIC18.41■□□□□ 0.54
BEST2Q8NFU1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.41■□□□□ 0.54
BEST2Q8NFU1 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms