Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 SCARNA2-201ENST00000458748 420 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 AC008608.2-201ENST00000606089 416 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 REXO1L6P-202ENST00000619970 1078 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 AL355877.3-201ENST00000622820 899 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 AL022326.1-202ENST00000641533 845 ntBASIC16.61■□□□□ 0.25
KRT78Q8N1N4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT78Q8N1N4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 SAPCD2P3-201ENST00000455031 850 ntBASIC16.6■□□□□ 0.25
KRT78Q8N1N4 BX005266.1-201ENST00000473402 457 ntBASIC16.6■□□□□ 0.25
KRT78Q8N1N4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 AC012313.10-201ENST00000623509 926 ntBASIC16.6■□□□□ 0.25
KRT78Q8N1N4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.6■□□□□ 0.25
KRT78Q8N1N4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT78Q8N1N4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT78Q8N1N4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms