Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 AL606495.2-201ENST00000605867 535 ntBASIC23.49■■□□□ 1.35
XRN1Q8IZH2 AC021097.1-201ENST00000607902 574 ntBASIC23.49■■□□□ 1.35
XRN1Q8IZH2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC23.49■■□□□ 1.35
XRN1Q8IZH2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 RPL37AP1-201ENST00000412502 279 ntBASIC23.48■■□□□ 1.35
XRN1Q8IZH2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 AL035456.1-201ENST00000456064 1369 ntBASIC23.48■■□□□ 1.35
XRN1Q8IZH2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
XRN1Q8IZH2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 AC090164.3-201ENST00000610780 2143 ntBASIC23.47■■□□□ 1.35
XRN1Q8IZH2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 AL353705.2-201ENST00000428243 662 ntBASIC23.47■■□□□ 1.35
XRN1Q8IZH2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
XRN1Q8IZH2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 AL512361.1-201ENST00000554200 418 ntBASIC23.46■■□□□ 1.35
XRN1Q8IZH2 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.46■■□□□ 1.35
XRN1Q8IZH2 SLC9A3P2-201ENST00000447821 2021 ntBASIC23.46■■□□□ 1.35
XRN1Q8IZH2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
XRN1Q8IZH2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
XRN1Q8IZH2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.35
XRN1Q8IZH2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
XRN1Q8IZH2 DGCR5-201ENST00000399539 862 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms