Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.22■□□□□ 0.83
CCDC83Q8IWF9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC83Q8IWF9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 AC114341.1-201ENST00000618070 349 ntBASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC83Q8IWF9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 GPR89P-201ENST00000407924 1495 ntBASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 AC104819.1-201ENST00000504587 486 ntBASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 KRT18P35-201ENST00000510488 1269 ntBASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 AC092119.3-201ENST00000612618 583 ntBASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 AP000867.4-201ENST00000641616 219 ntBASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC83Q8IWF9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms