Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 SPDYE14P-201ENST00000442619 822 ntBASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AC190387.1-201ENST00000551683 408 ntBASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AC140878.1-201ENST00000565277 250 ntBASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
NPAS4Q8IUM7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 AL031055.1-201ENST00000606362 631 ntBASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NPAS4Q8IUM7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AC008677.1-201ENST00000519230 1561 ntBASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 RNU1-129P-201ENST00000384064 167 ntBASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 MIR3909-201ENST00000579518 119 ntBASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 U1.21-201ENST00000580816 167 ntBASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.27■□□□□ 0.52
NPAS4Q8IUM7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 TOP3BP1-201ENST00000420768 1380 ntBASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NPAS4Q8IUM7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 EGFEM1P-202ENST00000431685 1563 ntBASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NPAS4Q8IUM7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms