Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 AL139288.1-201ENST00000623748 933 ntBASIC18.03■□□□□ 0.48
ALYREFQ86V81 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 INTS4P1-201ENST00000438455 1935 ntBASIC18.03■□□□□ 0.48
ALYREFQ86V81 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 MYLKP1-201ENST00000509077 1580 ntBASIC18.03■□□□□ 0.48
ALYREFQ86V81 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ALYREFQ86V81 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.03■□□□□ 0.48
ALYREFQ86V81 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 NKAPP1-205ENST00000585790 367 ntBASIC18.02■□□□□ 0.48
ALYREFQ86V81 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ALYREFQ86V81 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.02■□□□□ 0.48
ALYREFQ86V81 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ALYREFQ86V81 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ALYREFQ86V81 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.02■□□□□ 0.47
ALYREFQ86V81 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ALYREFQ86V81 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ALYREFQ86V81 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ALYREFQ86V81 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 LAGE3P1-201ENST00000425356 484 ntBASIC18.01■□□□□ 0.47
ALYREFQ86V81 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 BASP1P1-201ENST00000430708 665 ntBASIC18.01■□□□□ 0.47
ALYREFQ86V81 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ALYREFQ86V81 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ALYREFQ86V81 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms