Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC096633.1-201ENST00000422446 749 ntBASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC007967.3-201ENST00000434308 558 ntBASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 AC008608.2-201ENST00000606089 416 ntBASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP1BQ7LBR1 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 FLJ13224-201ENST00000313737 1514 ntBASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AC103564.2-201ENST00000432853 1299 ntBASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SCARNA2-201ENST00000458748 420 ntBASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AL160237.2-201ENST00000556165 472 ntBASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHMP1BQ7LBR1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 KRT8P47-201ENST00000604727 1398 ntBASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHMP1BQ7LBR1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms