Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM53Q6P2H8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.83■□□□□ 0.13
TMEM53Q6P2H8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AL645929.1-201ENST00000420084 975 ntBASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 AC022188.1-201ENST00000620960 1664 ntBASIC15.83■□□□□ 0.12
TMEM53Q6P2H8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 CICP14-201ENST00000629111 2732 ntBASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 AL031133.1-201ENST00000406807 723 ntBASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 MIR1224-201ENST00000408193 85 ntBASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 GPR32P1-201ENST00000601788 811 ntBASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 AGGF1P2-201ENST00000426656 2106 ntBASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TMEM53Q6P2H8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 IGHGP-201ENST00000390555 1178 ntBASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM53Q6P2H8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms