Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 AC010327.4-202ENST00000591484 748 ntBASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 AC055717.3-201ENST00000622967 595 ntBASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 AC092865.6-201ENST00000642101 219 ntBASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
H3F3CQ6NXT2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
H3F3CQ6NXT2 AL355312.1-201ENST00000407115 2176 ntBASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AC009053.2-201ENST00000563701 2365 ntBASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AC008764.6-201ENST00000595909 2069 ntBASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AC018845.2-201ENST00000568326 409 ntBASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 AL139384.1-201ENST00000612143 3047 ntBASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
H3F3CQ6NXT2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.86■□□□□ 0.13
H3F3CQ6NXT2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms