Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TPRX2P-201ENST00000535362 881 ntBASIC14.72□□□□□ -0.05
LRRK2Q5S007 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 RARRES2P9-201ENST00000565168 469 ntBASIC14.72□□□□□ -0.05
LRRK2Q5S007 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 AL589739.1-201ENST00000607720 493 ntBASIC14.72□□□□□ -0.05
LRRK2Q5S007 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 RPL37AP1-201ENST00000412502 279 ntBASIC14.72□□□□□ -0.05
LRRK2Q5S007 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 RPSAP52-203ENST00000622976 1023 ntBASIC14.72□□□□□ -0.05
LRRK2Q5S007 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
LRRK2Q5S007 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LRRK2Q5S007 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 FXNP2-201ENST00000411625 547 ntBASIC14.71□□□□□ -0.05
LRRK2Q5S007 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 IGHJ2P-201ENST00000454480 60 ntBASIC14.71□□□□□ -0.05
LRRK2Q5S007 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 BTNL10-201ENST00000595971 695 ntBASIC14.71□□□□□ -0.05
LRRK2Q5S007 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.71□□□□□ -0.05
LRRK2Q5S007 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
LRRK2Q5S007 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRK2Q5S007 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
LRRK2Q5S007 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRK2Q5S007 AC018665.1-201ENST00000622927 1362 ntBASIC14.71□□□□□ -0.06
LRRK2Q5S007 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.06
LRRK2Q5S007 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRK2Q5S007 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LRRK2Q5S007 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LRRK2Q5S007 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.71□□□□□ -0.06
LRRK2Q5S007 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AC004790.1-201ENST00000612686 536 ntBASIC14.7□□□□□ -0.06
LRRK2Q5S007 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
LRRK2Q5S007 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms