Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 KRT8P49-201ENST00000604166 1432 ntBASIC18.83■□□□□ 0.6
COBLL1Q53SF7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COBLL1Q53SF7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 FGFR3P6-201ENST00000457012 610 ntBASIC18.82■□□□□ 0.6
COBLL1Q53SF7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AC064862.7-201ENST00000604520 867 ntBASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AC013467.2-201ENST00000605472 835 ntBASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AL732292.2-201ENST00000609649 430 ntBASIC18.82■□□□□ 0.6
COBLL1Q53SF7 AL121772.3-201ENST00000610840 674 ntBASIC18.82■□□□□ 0.6
COBLL1Q53SF7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
COBLL1Q53SF7 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.81■□□□□ 0.6
COBLL1Q53SF7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 AL603756.1-201ENST00000606511 2163 ntBASIC18.81■□□□□ 0.6
COBLL1Q53SF7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 PAWRP1-201ENST00000451083 565 ntBASIC18.81■□□□□ 0.6
COBLL1Q53SF7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COBLL1Q53SF7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 HLA-A-202ENST00000376806 1854 ntBASIC18.8■□□□□ 0.6
COBLL1Q53SF7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COBLL1Q53SF7 HLA-J-202ENST00000469281 1241 ntBASIC18.8■□□□□ 0.6
COBLL1Q53SF7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms