Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DUX4L27-201ENST00000554796 1261 ntBASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 STK25P1-201ENST00000585406 838 ntBASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 AC097637.2-201ENST00000624096 1997 ntBASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTC1Q2NKJ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CTC1Q2NKJ3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 TNRC18P3-201ENST00000441896 2691 ntBASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.33■□□□□ 0.53
CTC1Q2NKJ3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 AL627223.1-201ENST00000416693 442 ntBASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 AC093677.2-201ENST00000600169 1863 ntBASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 AC138028.4-201ENST00000564984 1845 ntBASIC18.33■□□□□ 0.52
CTC1Q2NKJ3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTC1Q2NKJ3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms