Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.93■□□□□ 0.46
IRX4P78413 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
IRX4P78413 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
IRX4P78413 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 RPSAP43-201ENST00000402237 625 ntBASIC17.92■□□□□ 0.46
IRX4P78413 RPS2P1-201ENST00000434010 821 ntBASIC17.92■□□□□ 0.46
IRX4P78413 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
IRX4P78413 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.92■□□□□ 0.46
IRX4P78413 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.92■□□□□ 0.46
IRX4P78413 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 AD000864.1-201ENST00000624076 2295 ntBASIC17.92■□□□□ 0.46
IRX4P78413 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
IRX4P78413 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
IRX4P78413 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
IRX4P78413 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.92■□□□□ 0.46
IRX4P78413 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 AL023806.1-201ENST00000603994 1649 ntBASIC17.91■□□□□ 0.46
IRX4P78413 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 AC068472.1-201ENST00000474589 881 ntBASIC17.91■□□□□ 0.46
IRX4P78413 AC092910.1-201ENST00000482027 1129 ntBASIC17.91■□□□□ 0.46
IRX4P78413 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.91■□□□□ 0.46
IRX4P78413 AC034105.1-201ENST00000563488 319 ntBASIC17.91■□□□□ 0.46
IRX4P78413 AC027796.2-201ENST00000575326 344 ntBASIC17.91■□□□□ 0.46
IRX4P78413 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
IRX4P78413 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 AP001160.2-201ENST00000596071 487 ntBASIC17.91■□□□□ 0.46
IRX4P78413 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
IRX4P78413 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
IRX4P78413 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IRX4P78413 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
IRX4P78413 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.9■□□□□ 0.46
IRX4P78413 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
IRX4P78413 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
IRX4P78413 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms