Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
HIST1H3AP68431 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
HIST1H3AP68431 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HIST1H3AP68431 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HIST1H3AP68431 AP002414.1-201ENST00000391405 1147 ntBASIC15.02■□□□□ -0
HIST1H3AP68431 DUX4L17-201ENST00000557360 1267 ntBASIC15.02■□□□□ -0
HIST1H3AP68431 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.02■□□□□ -0
HIST1H3AP68431 NKAPP1-205ENST00000585790 367 ntBASIC15.02■□□□□ -0
HIST1H3AP68431 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.02■□□□□ -0
HIST1H3AP68431 AL022326.1-202ENST00000641533 845 ntBASIC15.02■□□□□ -0
HIST1H3AP68431 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.02□□□□□ -0.01
HIST1H3AP68431 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
HIST1H3AP68431 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 AC092068.3-201ENST00000587894 2016 ntBASIC15.02□□□□□ -0.01
HIST1H3AP68431 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.02□□□□□ -0.01
HIST1H3AP68431 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.02□□□□□ -0.01
HIST1H3AP68431 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 AL356309.3-201ENST00000624132 1934 ntBASIC15.02□□□□□ -0.01
HIST1H3AP68431 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HIST1H3AP68431 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
HIST1H3AP68431 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 AC106886.4-201ENST00000623557 2502 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 AC005915.1-201ENST00000624912 2018 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 BX005266.1-201ENST00000473402 457 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 AC091304.2-201ENST00000564639 760 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 MTDHP3-201ENST00000594186 672 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 REXO1L6P-202ENST00000619970 1078 ntBASIC15.01□□□□□ -0.01
HIST1H3AP68431 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.01□□□□□ -0.01
HIST1H3AP68431 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HIST1H3AP68431 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
HIST1H3AP68431 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
HIST1H3AP68431 PAN3-AS1-201ENST00000563843 1351 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15□□□□□ -0.01
HIST1H3AP68431 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15□□□□□ -0.01
HIST1H3AP68431 AL590787.1-201ENST00000568856 1315 ntBASIC15□□□□□ -0.01
HIST1H3AP68431 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15□□□□□ -0.01
HIST1H3AP68431 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms