Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SNRPEP62304 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 CICP23-201ENST00000605013 2741 ntBASIC13.17□□□□□ -0.3
SNRPEP62304 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.17□□□□□ -0.3
SNRPEP62304 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.17□□□□□ -0.3
SNRPEP62304 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SNRPEP62304 DGCR9-201ENST00000609630 2415 ntBASIC13.17□□□□□ -0.3
SNRPEP62304 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
SNRPEP62304 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.16□□□□□ -0.3
SNRPEP62304 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.16□□□□□ -0.3
SNRPEP62304 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.16□□□□□ -0.3
SNRPEP62304 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.16□□□□□ -0.3
SNRPEP62304 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.16□□□□□ -0.3
SNRPEP62304 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.16□□□□□ -0.3
SNRPEP62304 MIR6724-1-201ENST00000616420 92 ntBASIC13.16□□□□□ -0.3
SNRPEP62304 MIR6724-2-201ENST00000616483 92 ntBASIC13.16□□□□□ -0.3
SNRPEP62304 MIR6724-4-201ENST00000617390 92 ntBASIC13.16□□□□□ -0.3
SNRPEP62304 MIR6724-3-201ENST00000622482 92 ntBASIC13.16□□□□□ -0.3
SNRPEP62304 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SNRPEP62304 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.16□□□□□ -0.3
SNRPEP62304 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.16□□□□□ -0.3
SNRPEP62304 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.16□□□□□ -0.3
SNRPEP62304 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SNRPEP62304 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
SNRPEP62304 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC13.15□□□□□ -0.3
SNRPEP62304 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNRPEP62304 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 CICP17-201ENST00000418553 2377 ntBASIC13.15□□□□□ -0.3
SNRPEP62304 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
SNRPEP62304 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SNRPEP62304 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNRPEP62304 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNRPEP62304 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms