Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SEC61A1P61619 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SEC61A1P61619 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.11■□□□□ 0.01
SEC61A1P61619 DRAXINP1-201ENST00000437611 948 ntBASIC15.11■□□□□ 0.01
SEC61A1P61619 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.11■□□□□ 0.01
SEC61A1P61619 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.11■□□□□ 0.01
SEC61A1P61619 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 PRELID1P1-202ENST00000567272 903 ntBASIC15.11■□□□□ 0.01
SEC61A1P61619 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.11■□□□□ 0.01
SEC61A1P61619 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.11■□□□□ 0.01
SEC61A1P61619 AC090616.6-201ENST00000582640 721 ntBASIC15.11■□□□□ 0.01
SEC61A1P61619 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 AC124864.1-201ENST00000623408 392 ntBASIC15.11■□□□□ 0.01
SEC61A1P61619 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SEC61A1P61619 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SEC61A1P61619 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SEC61A1P61619 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.1■□□□□ 0.01
SEC61A1P61619 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.1■□□□□ 0.01
SEC61A1P61619 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.1■□□□□ 0.01
SEC61A1P61619 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.1■□□□□ 0.01
SEC61A1P61619 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SEC61A1P61619 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SEC61A1P61619 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms