Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.95■□□□□ 0.3
ABCE1P61221 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.95■□□□□ 0.3
ABCE1P61221 AC005332.3-201ENST00000589904 676 ntBASIC16.95■□□□□ 0.3
ABCE1P61221 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.95■□□□□ 0.3
ABCE1P61221 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.95■□□□□ 0.3
ABCE1P61221 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ABCE1P61221 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 AL662844.4-201ENST00000606367 2838 ntBASIC16.95■□□□□ 0.3
ABCE1P61221 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ABCE1P61221 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
ABCE1P61221 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.95■□□□□ 0.3
ABCE1P61221 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ABCE1P61221 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ABCE1P61221 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PCDHA1-201ENST00000378133 2726 ntBASIC16.94■□□□□ 0.3
ABCE1P61221 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ABCE1P61221 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ABCE1P61221 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.94■□□□□ 0.3
ABCE1P61221 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.94■□□□□ 0.3
ABCE1P61221 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.94■□□□□ 0.3
ABCE1P61221 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.94■□□□□ 0.3
ABCE1P61221 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ABCE1P61221 AL390719.2-201ENST00000606993 987 ntBASIC16.94■□□□□ 0.3
ABCE1P61221 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ABCE1P61221 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.94■□□□□ 0.3
ABCE1P61221 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.94■□□□□ 0.3
ABCE1P61221 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ABCE1P61221 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.93■□□□□ 0.3
ABCE1P61221 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.93■□□□□ 0.3
ABCE1P61221 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 PKD1P5-201ENST00000532415 10291 ntBASIC16.93■□□□□ 0.3
ABCE1P61221 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.93■□□□□ 0.3
ABCE1P61221 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.93■□□□□ 0.3
ABCE1P61221 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.93■□□□□ 0.3
ABCE1P61221 AC011558.1-201ENST00000623459 338 ntBASIC16.93■□□□□ 0.3
ABCE1P61221 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ABCE1P61221 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms