Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 AC011506.1-201ENST00000474329 610 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 RARRES2P10-201ENST00000564312 460 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 AP000692.2-201ENST00000608391 879 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 AC008622.2-201ENST00000617006 1229 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 FAM197Y4-202ENST00000622692 608 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
CKS1BP61024 AC073648.6-201ENST00000641589 218 ntBASIC12.12□□□□□ -0.47
CKS1BP61024 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.12□□□□□ -0.47
CKS1BP61024 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.12□□□□□ -0.47
CKS1BP61024 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CKS1BP61024 AL135905.2-201ENST00000584934 1404 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 KRT18P55-202ENST00000578578 1546 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 AC008040.2-201ENST00000461049 708 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 IRX5-204ENST00000560154 879 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CKS1BP61024 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 TBC1D3P2-202ENST00000577902 1649 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 AL023806.1-201ENST00000603994 1649 ntBASIC12.11□□□□□ -0.47
CKS1BP61024 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.11□□□□□ -0.47
CKS1BP61024 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.11□□□□□ -0.47
CKS1BP61024 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CKS1BP61024 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CKS1BP61024 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.1□□□□□ -0.47
CKS1BP61024 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CKS1BP61024 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms