Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 MPRIPP1-201ENST00000452433 1089 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 KRT8P23-201ENST00000560090 1207 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 AC104794.3-201ENST00000566840 1248 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 CASP16P-204ENST00000635032 809 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 AC084121.4-201ENST00000641598 221 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 AF228730.8-201ENST00000642140 221 ntBASIC14.25□□□□□ -0.13
RIPPLY3P57055 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RIPPLY3P57055 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RIPPLY3P57055 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 AL355306.1-201ENST00000415580 579 ntBASIC14.24□□□□□ -0.13
RIPPLY3P57055 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 AC253536.4-201ENST00000440539 267 ntBASIC14.24□□□□□ -0.13
RIPPLY3P57055 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 AL139099.5-201ENST00000635274 300 ntBASIC14.24□□□□□ -0.13
RIPPLY3P57055 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 PMPCAP1-201ENST00000508114 1576 ntBASIC14.24□□□□□ -0.13
RIPPLY3P57055 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RIPPLY3P57055 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.24□□□□□ -0.13
RIPPLY3P57055 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 AC008677.1-201ENST00000519230 1561 ntBASIC14.23□□□□□ -0.13
RIPPLY3P57055 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RIPPLY3P57055 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.23□□□□□ -0.13
RIPPLY3P57055 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms