Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.97■□□□□ 0.15
PER3P56645 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.97■□□□□ 0.15
PER3P56645 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.97■□□□□ 0.15
PER3P56645 AC025062.2-201ENST00000605477 670 ntBASIC15.97■□□□□ 0.15
PER3P56645 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.97■□□□□ 0.15
PER3P56645 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 AL596257.1-201ENST00000641463 2694 ntBASIC15.97■□□□□ 0.15
PER3P56645 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PER3P56645 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PER3P56645 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.96■□□□□ 0.15
PER3P56645 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 AC011676.5-201ENST00000624864 2660 ntBASIC15.96■□□□□ 0.15
PER3P56645 AC108860.2-201ENST00000562760 2183 ntBASIC15.96■□□□□ 0.15
PER3P56645 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.96■□□□□ 0.15
PER3P56645 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.96■□□□□ 0.15
PER3P56645 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.96■□□□□ 0.15
PER3P56645 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.96■□□□□ 0.15
PER3P56645 AC007967.2-201ENST00000432613 625 ntBASIC15.96■□□□□ 0.15
PER3P56645 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.96■□□□□ 0.15
PER3P56645 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 AC012640.2-201ENST00000561606 901 ntBASIC15.96■□□□□ 0.15
PER3P56645 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PER3P56645 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.96■□□□□ 0.15
PER3P56645 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.96■□□□□ 0.15
PER3P56645 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PER3P56645 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PER3P56645 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 KRT18P28-201ENST00000453838 1332 ntBASIC15.95■□□□□ 0.14
PER3P56645 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PER3P56645 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.95■□□□□ 0.14
PER3P56645 AP006288.1-201ENST00000446065 395 ntBASIC15.95■□□□□ 0.14
PER3P56645 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.95■□□□□ 0.14
PER3P56645 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PER3P56645 AC112698.1-201ENST00000510299 916 ntBASIC15.95■□□□□ 0.14
PER3P56645 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.95■□□□□ 0.14
PER3P56645 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 SNHG9-202ENST00000564014 471 ntBASIC15.95■□□□□ 0.14
PER3P56645 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.95■□□□□ 0.14
PER3P56645 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.95■□□□□ 0.14
PER3P56645 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 AC005593.1-201ENST00000624894 515 ntBASIC15.95■□□□□ 0.14
PER3P56645 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.95■□□□□ 0.14
PER3P56645 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PER3P56645 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PER3P56645 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms