Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXA3P55318 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FOXA3P55318 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
FOXA3P55318 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FOXA3P55318 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FOXA3P55318 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXA3P55318 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXA3P55318 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXA3P55318 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
FOXA3P55318 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
FOXA3P55318 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
FOXA3P55318 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 SLC25A1P3-201ENST00000395415 828 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 KRT18P29-201ENST00000397031 1267 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 RNA5SP413-201ENST00000516373 109 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.96□□□□□ -0.33
FOXA3P55318 TK2-204ENST00000525974 1178 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.96□□□□□ -0.33
FOXA3P55318 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 AC142086.2-201ENST00000569753 217 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 RN7SL471P-201ENST00000580476 299 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 AF186192.3-201ENST00000583427 947 ntBASIC12.96□□□□□ -0.33
FOXA3P55318 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
FOXA3P55318 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.96□□□□□ -0.33
FOXA3P55318 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXA3P55318 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
FOXA3P55318 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 AC024909.3-201ENST00000611513 2257 ntBASIC12.96□□□□□ -0.34
FOXA3P55318 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 AC007326.2-201ENST00000624224 7579 ntBASIC12.96□□□□□ -0.34
FOXA3P55318 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
FOXA3P55318 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
FOXA3P55318 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
FOXA3P55318 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.96□□□□□ -0.34
FOXA3P55318 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
FOXA3P55318 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.96□□□□□ -0.34
FOXA3P55318 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.95□□□□□ -0.34
FOXA3P55318 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.95□□□□□ -0.34
FOXA3P55318 KRT18P65-201ENST00000439811 1286 ntBASIC12.95□□□□□ -0.34
FOXA3P55318 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 SLC25A1P4-201ENST00000567977 778 ntBASIC12.95□□□□□ -0.34
FOXA3P55318 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FOXA3P55318 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FOXA3P55318 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.95□□□□□ -0.34
FOXA3P55318 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms