Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH6P55285 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 KRT18P31-201ENST00000506277 1292 ntBASIC17.89■□□□□ 0.45
CDH6P55285 KRT18P56-201ENST00000507275 550 ntBASIC17.89■□□□□ 0.45
CDH6P55285 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH6P55285 AC124947.2-201ENST00000547118 1133 ntBASIC17.89■□□□□ 0.45
CDH6P55285 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH6P55285 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH6P55285 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH6P55285 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CDH6P55285 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDH6P55285 GPR89P-201ENST00000407924 1495 ntBASIC17.88■□□□□ 0.45
CDH6P55285 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH6P55285 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 TSPY19P-201ENST00000418461 509 ntBASIC17.88■□□□□ 0.45
CDH6P55285 ACTG1P4-201ENST00000425123 1122 ntBASIC17.88■□□□□ 0.45
CDH6P55285 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 TSPY18P-201ENST00000441642 509 ntBASIC17.88■□□□□ 0.45
CDH6P55285 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH6P55285 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 AC106795.1-205ENST00000512851 1056 ntBASIC17.88■□□□□ 0.45
CDH6P55285 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH6P55285 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH6P55285 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 AC105020.1-201ENST00000435356 2205 ntBASIC17.88■□□□□ 0.45
CDH6P55285 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
CDH6P55285 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH6P55285 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH6P55285 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH6P55285 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH6P55285 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 AC099398.1-201ENST00000567919 2776 ntBASIC17.87■□□□□ 0.45
CDH6P55285 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH6P55285 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH6P55285 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH6P55285 BX005266.1-201ENST00000473402 457 ntBASIC17.87■□□□□ 0.45
CDH6P55285 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDH6P55285 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH6P55285 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.87■□□□□ 0.45
CDH6P55285 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH6P55285 CLEC4GP1-201ENST00000596555 870 ntBASIC17.87■□□□□ 0.45
CDH6P55285 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH6P55285 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH6P55285 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH6P55285 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH6P55285 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms