Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.62■□□□□ 0.73
GTF2A2P52657 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2A2P52657 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.62■□□□□ 0.73
GTF2A2P52657 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2A2P52657 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 AC018529.1-201ENST00000613063 361 ntBASIC19.62■□□□□ 0.73
GTF2A2P52657 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.62■□□□□ 0.73
GTF2A2P52657 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
GTF2A2P52657 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF2A2P52657 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF2A2P52657 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A2P52657 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GTF2A2P52657 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.61■□□□□ 0.73
GTF2A2P52657 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.61■□□□□ 0.73
GTF2A2P52657 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GTF2A2P52657 AC091167.2-201ENST00000579581 588 ntBASIC19.61■□□□□ 0.73
GTF2A2P52657 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 AC004408.2-201ENST00000623613 2777 ntBASIC19.61■□□□□ 0.73
GTF2A2P52657 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
GTF2A2P52657 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GTF2A2P52657 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 CU639417.3-201ENST00000624240 1404 ntBASIC19.6■□□□□ 0.73
GTF2A2P52657 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 AC016027.1-202ENST00000607927 1699 ntBASIC19.6■□□□□ 0.73
GTF2A2P52657 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 SPTLC1P1-201ENST00000447199 261 ntBASIC19.6■□□□□ 0.73
GTF2A2P52657 KRT17P7-201ENST00000451704 1104 ntBASIC19.6■□□□□ 0.73
GTF2A2P52657 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF2A2P52657 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.6■□□□□ 0.73
GTF2A2P52657 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
GTF2A2P52657 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GTF2A2P52657 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GTF2A2P52657 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
GTF2A2P52657 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
GTF2A2P52657 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.59■□□□□ 0.73
GTF2A2P52657 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms