Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GTF2A1P52655 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.9■□□□□ 0.3
GTF2A1P52655 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.9■□□□□ 0.3
GTF2A1P52655 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 AC005181.1-201ENST00000604782 1256 ntBASIC16.9■□□□□ 0.3
GTF2A1P52655 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.9■□□□□ 0.3
GTF2A1P52655 AC126335.2-201ENST00000623362 4637 ntBASIC16.9■□□□□ 0.3
GTF2A1P52655 AC004817.3-201ENST00000602957 2129 ntBASIC16.9■□□□□ 0.3
GTF2A1P52655 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GTF2A1P52655 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.9■□□□□ 0.3
GTF2A1P52655 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
GTF2A1P52655 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GTF2A1P52655 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.89■□□□□ 0.29
GTF2A1P52655 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 KRT8P8-201ENST00000434750 1448 ntBASIC16.89■□□□□ 0.29
GTF2A1P52655 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GTF2A1P52655 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.89■□□□□ 0.29
GTF2A1P52655 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.89■□□□□ 0.29
GTF2A1P52655 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GTF2A1P52655 AC005829.2-201ENST00000571422 1056 ntBASIC16.89■□□□□ 0.29
GTF2A1P52655 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.89■□□□□ 0.29
GTF2A1P52655 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
GTF2A1P52655 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.89■□□□□ 0.29
GTF2A1P52655 AC007292.2-201ENST00000593524 1812 ntBASIC16.89■□□□□ 0.29
GTF2A1P52655 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GTF2A1P52655 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.88■□□□□ 0.29
GTF2A1P52655 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GTF2A1P52655 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.88■□□□□ 0.29
GTF2A1P52655 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
GTF2A1P52655 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
GTF2A1P52655 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
GTF2A1P52655 AC006557.6-201ENST00000623071 864 ntBASIC16.88■□□□□ 0.29
GTF2A1P52655 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms