Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 KRT18P31-201ENST00000506277 1292 ntBASIC17.42■□□□□ 0.38
HADHAP40939 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.42■□□□□ 0.38
HADHAP40939 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.42■□□□□ 0.38
HADHAP40939 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 LINC01711-201ENST00000598340 967 ntBASIC17.42■□□□□ 0.38
HADHAP40939 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
HADHAP40939 AC099398.1-201ENST00000567919 2776 ntBASIC17.42■□□□□ 0.38
HADHAP40939 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.42■□□□□ 0.38
HADHAP40939 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HADHAP40939 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
HADHAP40939 AC124067.4-201ENST00000519691 2379 ntBASIC17.42■□□□□ 0.38
HADHAP40939 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 AC093525.9-201ENST00000624961 1746 ntBASIC17.41■□□□□ 0.38
HADHAP40939 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HADHAP40939 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.41■□□□□ 0.38
HADHAP40939 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.41■□□□□ 0.38
HADHAP40939 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 TSPY19P-201ENST00000418461 509 ntBASIC17.41■□□□□ 0.38
HADHAP40939 AL020989.1-201ENST00000422979 469 ntBASIC17.41■□□□□ 0.38
HADHAP40939 AL450487.1-201ENST00000426799 995 ntBASIC17.41■□□□□ 0.38
HADHAP40939 DUSP5P1-201ENST00000441325 1139 ntBASIC17.41■□□□□ 0.38
HADHAP40939 TSPY18P-201ENST00000441642 509 ntBASIC17.41■□□□□ 0.38
HADHAP40939 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 AC091304.2-201ENST00000564639 760 ntBASIC17.41■□□□□ 0.38
HADHAP40939 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.41■□□□□ 0.38
HADHAP40939 CLEC4GP1-201ENST00000596555 870 ntBASIC17.41■□□□□ 0.38
HADHAP40939 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HADHAP40939 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HADHAP40939 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.41■□□□□ 0.38
HADHAP40939 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HADHAP40939 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.41■□□□□ 0.38
HADHAP40939 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HADHAP40939 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HADHAP40939 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HADHAP40939 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.4■□□□□ 0.38
HADHAP40939 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.4■□□□□ 0.38
HADHAP40939 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HADHAP40939 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.4■□□□□ 0.38
HADHAP40939 AC132008.2-207ENST00000454517 770 ntBASIC17.4■□□□□ 0.38
HADHAP40939 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.4■□□□□ 0.38
HADHAP40939 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.4■□□□□ 0.38
HADHAP40939 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.4■□□□□ 0.38
HADHAP40939 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.4■□□□□ 0.38
HADHAP40939 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HADHAP40939 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.4■□□□□ 0.38
HADHAP40939 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms