Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
USP8P40818 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 NSUN5P1-202ENST00000421140 1535 ntBASIC18.79■□□□□ 0.6
USP8P40818 NSUN5P2-203ENST00000457352 1529 ntBASIC18.79■□□□□ 0.6
USP8P40818 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.79■□□□□ 0.6
USP8P40818 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP8P40818 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP8P40818 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.78■□□□□ 0.6
USP8P40818 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP8P40818 TP73-AS1-210ENST00000637775 1455 ntBASIC18.78■□□□□ 0.6
USP8P40818 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.78■□□□□ 0.6
USP8P40818 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 KRT8P10-201ENST00000450021 1447 ntBASIC18.78■□□□□ 0.6
USP8P40818 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
USP8P40818 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.78■□□□□ 0.6
USP8P40818 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.78■□□□□ 0.6
USP8P40818 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
USP8P40818 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.78■□□□□ 0.6
USP8P40818 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP8P40818 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
USP8P40818 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.77■□□□□ 0.6
USP8P40818 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
USP8P40818 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 MYCLP1-201ENST00000372451 1075 ntBASIC18.77■□□□□ 0.6
USP8P40818 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.77■□□□□ 0.6
USP8P40818 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 AC103564.2-201ENST00000432853 1299 ntBASIC18.77■□□□□ 0.6
USP8P40818 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.77■□□□□ 0.6
USP8P40818 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.77■□□□□ 0.6
USP8P40818 AC104819.1-201ENST00000504587 486 ntBASIC18.77■□□□□ 0.6
USP8P40818 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.77■□□□□ 0.6
USP8P40818 MIR3180-1-201ENST00000580374 94 ntBASIC18.77■□□□□ 0.6
USP8P40818 MIR3180-3-201ENST00000584616 94 ntBASIC18.77■□□□□ 0.6
USP8P40818 AC092329.2-201ENST00000598402 547 ntBASIC18.77■□□□□ 0.6
USP8P40818 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP8P40818 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
USP8P40818 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP8P40818 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP8P40818 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.77■□□□□ 0.59
USP8P40818 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP8P40818 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP8P40818 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 AL049757.1-201ENST00000616842 1596 ntBASIC18.76■□□□□ 0.59
USP8P40818 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.76■□□□□ 0.59
USP8P40818 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP8P40818 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP8P40818 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.76■□□□□ 0.59
USP8P40818 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms