Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT20P35900 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.4■□□□□ 0.22
KRT20P35900 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
KRT20P35900 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 AL513477.1-201ENST00000602865 2407 ntBASIC16.4■□□□□ 0.22
KRT20P35900 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 PCDH8P1-201ENST00000428983 2773 ntBASIC16.4■□□□□ 0.22
KRT20P35900 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.4■□□□□ 0.22
KRT20P35900 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KRT20P35900 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
KRT20P35900 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KRT20P35900 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
KRT20P35900 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT20P35900 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.39■□□□□ 0.21
KRT20P35900 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
KRT20P35900 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KRT20P35900 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KRT20P35900 FLJ16779-201ENST00000612722 7638 ntBASIC16.39■□□□□ 0.21
KRT20P35900 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.38■□□□□ 0.21
KRT20P35900 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT20P35900 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
KRT20P35900 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 AC105020.1-201ENST00000435356 2205 ntBASIC16.38■□□□□ 0.21
KRT20P35900 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 AC125634.1-201ENST00000438758 1403 ntBASIC16.38■□□□□ 0.21
KRT20P35900 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
KRT20P35900 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT20P35900 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 AC096633.1-201ENST00000422446 749 ntBASIC16.38■□□□□ 0.21
KRT20P35900 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KRT20P35900 AL845331.1-201ENST00000424978 1190 ntBASIC16.38■□□□□ 0.21
KRT20P35900 AGGF1P2-201ENST00000426656 2106 ntBASIC16.38■□□□□ 0.21
KRT20P35900 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT20P35900 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT20P35900 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT20P35900 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.38■□□□□ 0.21
KRT20P35900 MIR3652-201ENST00000579335 131 ntBASIC16.38■□□□□ 0.21
KRT20P35900 MIR3180-1-201ENST00000580374 94 ntBASIC16.38■□□□□ 0.21
KRT20P35900 MIR3180-3-201ENST00000584616 94 ntBASIC16.38■□□□□ 0.21
KRT20P35900 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.38■□□□□ 0.21
KRT20P35900 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
KRT20P35900 NSUN5P1-202ENST00000421140 1535 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms