Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.17■□□□□ 0.5
CHKAP35790 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHKAP35790 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.17■□□□□ 0.5
CHKAP35790 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.16■□□□□ 0.5
CHKAP35790 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.16■□□□□ 0.5
CHKAP35790 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 SPDYE21P-201ENST00000413323 827 ntBASIC18.16■□□□□ 0.5
CHKAP35790 AL020989.1-201ENST00000422979 469 ntBASIC18.16■□□□□ 0.5
CHKAP35790 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 AC025062.2-201ENST00000605477 670 ntBASIC18.16■□□□□ 0.5
CHKAP35790 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.16■□□□□ 0.5
CHKAP35790 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.16■□□□□ 0.5
CHKAP35790 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHKAP35790 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 AC060834.1-201ENST00000443027 2032 ntBASIC18.16■□□□□ 0.5
CHKAP35790 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
CHKAP35790 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.16■□□□□ 0.5
CHKAP35790 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHKAP35790 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.15■□□□□ 0.5
CHKAP35790 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.15■□□□□ 0.5
CHKAP35790 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 AP000347.1-202ENST00000435868 847 ntBASIC18.15■□□□□ 0.5
CHKAP35790 IGHV3-52-201ENST00000519770 353 ntBASIC18.15■□□□□ 0.5
CHKAP35790 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.15■□□□□ 0.5
CHKAP35790 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.15■□□□□ 0.5
CHKAP35790 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CHKAP35790 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 AC107918.4-202ENST00000641623 219 ntBASIC18.15■□□□□ 0.5
CHKAP35790 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
CHKAP35790 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CHKAP35790 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHKAP35790 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHKAP35790 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.14■□□□□ 0.5
CHKAP35790 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.14■□□□□ 0.5
CHKAP35790 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.14■□□□□ 0.5
CHKAP35790 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHKAP35790 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.14■□□□□ 0.5
CHKAP35790 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHKAP35790 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHKAP35790 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.14■□□□□ 0.49
CHKAP35790 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CHKAP35790 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHKAP35790 AC003669.1-201ENST00000334569 611 ntBASIC18.14■□□□□ 0.49
CHKAP35790 BX005266.1-201ENST00000473402 457 ntBASIC18.14■□□□□ 0.49
CHKAP35790 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.14■□□□□ 0.49
CHKAP35790 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.14■□□□□ 0.49
CHKAP35790 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms