Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS4P35443 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
THBS4P35443 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 MYCLP1-201ENST00000372451 1075 ntBASIC15.15■□□□□ 0.02
THBS4P35443 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
THBS4P35443 AF186996.4-201ENST00000467186 377 ntBASIC15.15■□□□□ 0.02
THBS4P35443 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 AL662844.1-201ENST00000546340 181 ntBASIC15.15■□□□□ 0.02
THBS4P35443 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.15■□□□□ 0.02
THBS4P35443 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.15■□□□□ 0.02
THBS4P35443 AC064862.7-201ENST00000604520 867 ntBASIC15.15■□□□□ 0.02
THBS4P35443 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.15■□□□□ 0.02
THBS4P35443 AD001527.2-201ENST00000622994 785 ntBASIC15.15■□□□□ 0.02
THBS4P35443 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.15■□□□□ 0.02
THBS4P35443 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
THBS4P35443 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
THBS4P35443 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
THBS4P35443 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
THBS4P35443 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
THBS4P35443 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.14■□□□□ 0.01
THBS4P35443 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 RNPS1P1-201ENST00000507437 918 ntBASIC15.14■□□□□ 0.01
THBS4P35443 AC073648.2-201ENST00000510116 352 ntBASIC15.14■□□□□ 0.01
THBS4P35443 SART3-203ENST00000546611 1184 ntBASIC15.14■□□□□ 0.01
THBS4P35443 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.14■□□□□ 0.01
THBS4P35443 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.14■□□□□ 0.01
THBS4P35443 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
THBS4P35443 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.14■□□□□ 0.01
THBS4P35443 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 PMPCAP1-201ENST00000508114 1576 ntBASIC15.14■□□□□ 0.01
THBS4P35443 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.14■□□□□ 0.01
THBS4P35443 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.14■□□□□ 0.01
THBS4P35443 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THBS4P35443 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THBS4P35443 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THBS4P35443 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS4P35443 KRT18P67-201ENST00000432816 1264 ntBASIC15.13■□□□□ 0.01
THBS4P35443 AC079776.4-201ENST00000511039 504 ntBASIC15.13■□□□□ 0.01
THBS4P35443 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.13■□□□□ 0.01
THBS4P35443 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.13■□□□□ 0.01
THBS4P35443 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.13■□□□□ 0.01
THBS4P35443 AC109462.3-201ENST00000573934 613 ntBASIC15.13■□□□□ 0.01
THBS4P35443 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THBS4P35443 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms