Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHRNA5P30532 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CHRNA5P30532 AC140912.1-201ENST00000577171 1054 ntBASIC20.89■□□□□ 0.93
CHRNA5P30532 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CHRNA5P30532 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.89■□□□□ 0.93
CHRNA5P30532 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
CHRNA5P30532 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA5P30532 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA5P30532 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA5P30532 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA5P30532 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.89■□□□□ 0.93
CHRNA5P30532 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA5P30532 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA5P30532 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHRNA5P30532 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA5P30532 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA5P30532 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA5P30532 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHRNA5P30532 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 AC079776.1-201ENST00000401540 1152 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 MIR1909-201ENST00000411312 80 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.88■□□□□ 0.93
CHRNA5P30532 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.88■□□□□ 0.93
CHRNA5P30532 AC132938.2-201ENST00000579188 680 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 AL606495.2-201ENST00000605867 535 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 AC017083.2-201ENST00000608069 979 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 AL844908.2-201ENST00000609461 460 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 AC004840.1-201ENST00000636359 365 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 AL591163.1-201ENST00000641757 987 ntBASIC20.88■□□□□ 0.93
CHRNA5P30532 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.88■□□□□ 0.93
CHRNA5P30532 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.88■□□□□ 0.93
CHRNA5P30532 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHRNA5P30532 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA5P30532 MXI1-205ENST00000393134 889 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA5P30532 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHRNA5P30532 RPS2P32-201ENST00000439199 892 ntBASIC20.87■□□□□ 0.93
CHRNA5P30532 AC245100.3-201ENST00000441281 285 ntBASIC20.87■□□□□ 0.93
CHRNA5P30532 GNAQP1-201ENST00000444815 1067 ntBASIC20.87■□□□□ 0.93
CHRNA5P30532 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.87■□□□□ 0.93
CHRNA5P30532 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.87■□□□□ 0.93
CHRNA5P30532 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CHRNA5P30532 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHRNA5P30532 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHRNA5P30532 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.87■□□□□ 0.93
CHRNA5P30532 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHRNA5P30532 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CHRNA5P30532 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 AL353779.1-201ENST00000434793 351 ntBASIC20.86■□□□□ 0.93
CHRNA5P30532 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNA5P30532 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNA5P30532 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.86■□□□□ 0.93
CHRNA5P30532 TEX28P1-201ENST00000613479 1221 ntBASIC20.86■□□□□ 0.93
CHRNA5P30532 TEX28P2-201ENST00000617764 1221 ntBASIC20.86■□□□□ 0.93
CHRNA5P30532 FLJ13224-201ENST00000313737 1514 ntBASIC20.86■□□□□ 0.93
CHRNA5P30532 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.86■□□□□ 0.93
CHRNA5P30532 LYSMD4-203ENST00000378904 2122 ntBASIC20.86■□□□□ 0.93
CHRNA5P30532 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHRNA5P30532 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CHRNA5P30532 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.85■□□□□ 0.93
CHRNA5P30532 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHRNA5P30532 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA5P30532 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.85■□□□□ 0.93
CHRNA5P30532 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHRNA5P30532 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms