Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
COL8A2P25067 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.53□□□□□ -0.08
COL8A2P25067 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.53□□□□□ -0.08
COL8A2P25067 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 GGTLC5P-201ENST00000617623 998 ntBASIC14.53□□□□□ -0.08
COL8A2P25067 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.53□□□□□ -0.08
COL8A2P25067 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL8A2P25067 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.53□□□□□ -0.08
COL8A2P25067 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.52□□□□□ -0.08
COL8A2P25067 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 AC133963.1-201ENST00000504166 1679 ntBASIC14.52□□□□□ -0.08
COL8A2P25067 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.52□□□□□ -0.08
COL8A2P25067 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.52□□□□□ -0.08
COL8A2P25067 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.52□□□□□ -0.08
COL8A2P25067 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
COL8A2P25067 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL8A2P25067 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 YBX2P1-201ENST00000394192 760 ntBASIC14.52□□□□□ -0.09
COL8A2P25067 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.52□□□□□ -0.09
COL8A2P25067 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 HCG4B-203ENST00000450128 991 ntBASIC14.52□□□□□ -0.09
COL8A2P25067 AC112482.1-201ENST00000492080 688 ntBASIC14.52□□□□□ -0.09
COL8A2P25067 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.52□□□□□ -0.09
COL8A2P25067 AC018845.2-201ENST00000568326 409 ntBASIC14.52□□□□□ -0.09
COL8A2P25067 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.52□□□□□ -0.09
COL8A2P25067 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.52□□□□□ -0.09
COL8A2P25067 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.52□□□□□ -0.09
COL8A2P25067 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
COL8A2P25067 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
COL8A2P25067 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
COL8A2P25067 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.51□□□□□ -0.09
COL8A2P25067 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL8A2P25067 MIR1233-2-201ENST00000408138 82 ntBASIC14.51□□□□□ -0.09
COL8A2P25067 MIR1233-1-201ENST00000408722 82 ntBASIC14.51□□□□□ -0.09
COL8A2P25067 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.51□□□□□ -0.09
COL8A2P25067 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
COL8A2P25067 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.51□□□□□ -0.09
COL8A2P25067 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 AC010327.4-202ENST00000591484 748 ntBASIC14.51□□□□□ -0.09
COL8A2P25067 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.51□□□□□ -0.09
COL8A2P25067 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
COL8A2P25067 AC055717.3-201ENST00000622967 595 ntBASIC14.51□□□□□ -0.09
COL8A2P25067 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.51□□□□□ -0.09
COL8A2P25067 AC092865.6-201ENST00000642101 219 ntBASIC14.51□□□□□ -0.09
COL8A2P25067 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
COL8A2P25067 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
COL8A2P25067 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms