Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP8P22894 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.04■□□□□ 0.48
MMP8P22894 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP8P22894 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP8P22894 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP8P22894 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.04■□□□□ 0.48
MMP8P22894 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.04■□□□□ 0.48
MMP8P22894 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.04■□□□□ 0.48
MMP8P22894 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 AC138932.1-201ENST00000534164 6830 ntBASIC18.04■□□□□ 0.48
MMP8P22894 AC099398.1-201ENST00000567919 2776 ntBASIC18.04■□□□□ 0.48
MMP8P22894 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
MMP8P22894 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MMP8P22894 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MMP8P22894 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 TUBB8P12-201ENST00000308911 1335 ntBASIC18.03■□□□□ 0.48
MMP8P22894 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 TUBB7P-202ENST00000428444 1305 ntBASIC18.03■□□□□ 0.48
MMP8P22894 TUBB8P7-204ENST00000567960 1332 ntBASIC18.03■□□□□ 0.48
MMP8P22894 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MMP8P22894 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.03■□□□□ 0.48
MMP8P22894 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 EMBP1-201ENST00000458200 901 ntBASIC18.03■□□□□ 0.48
MMP8P22894 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.03■□□□□ 0.48
MMP8P22894 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.03■□□□□ 0.48
MMP8P22894 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 AC107918.4-202ENST00000641623 219 ntBASIC18.03■□□□□ 0.48
MMP8P22894 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
MMP8P22894 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
MMP8P22894 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.03■□□□□ 0.48
MMP8P22894 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MMP8P22894 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MMP8P22894 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
MMP8P22894 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
MMP8P22894 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.02■□□□□ 0.48
MMP8P22894 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
MMP8P22894 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.02■□□□□ 0.48
MMP8P22894 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MMP8P22894 LAGE3P1-201ENST00000425356 484 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms