Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.98■□□□□ 0.63
SMPD1P17405 HCG4-201ENST00000418983 998 ntBASIC18.98■□□□□ 0.63
SMPD1P17405 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMPD1P17405 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMPD1P17405 INGX-202ENST00000489074 768 ntBASIC18.98■□□□□ 0.63
SMPD1P17405 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.98■□□□□ 0.63
SMPD1P17405 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.98■□□□□ 0.63
SMPD1P17405 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMPD1P17405 WASH6P-202ENST00000359512 1437 ntBASIC18.98■□□□□ 0.63
SMPD1P17405 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMPD1P17405 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.98■□□□□ 0.63
SMPD1P17405 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 TOP3BP1-201ENST00000420768 1380 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 RNU1-129P-201ENST00000384064 167 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 SLC25A1P3-201ENST00000395415 828 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.97■□□□□ 0.63
SMPD1P17405 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.97■□□□□ 0.63
SMPD1P17405 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 PMS2P4-201ENST00000412466 1052 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.97■□□□□ 0.63
SMPD1P17405 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.97■□□□□ 0.63
SMPD1P17405 U1.21-201ENST00000580816 167 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.97■□□□□ 0.63
SMPD1P17405 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMPD1P17405 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SMPD1P17405 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMPD1P17405 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMPD1P17405 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.97■□□□□ 0.63
SMPD1P17405 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.96■□□□□ 0.63
SMPD1P17405 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 AC107890.1-201ENST00000422478 521 ntBASIC18.96■□□□□ 0.63
SMPD1P17405 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 AC125807.1-201ENST00000483097 614 ntBASIC18.96■□□□□ 0.63
SMPD1P17405 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.96■□□□□ 0.63
SMPD1P17405 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.96■□□□□ 0.63
SMPD1P17405 SLC25A39P2-201ENST00000537614 270 ntBASIC18.96■□□□□ 0.63
SMPD1P17405 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.96■□□□□ 0.63
SMPD1P17405 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.96■□□□□ 0.63
SMPD1P17405 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.96■□□□□ 0.63
SMPD1P17405 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMPD1P17405 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SMPD1P17405 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.96■□□□□ 0.63
SMPD1P17405 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMPD1P17405 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMPD1P17405 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMPD1P17405 FO538757.1-201ENST00000623083 1397 ntBASIC18.95■□□□□ 0.62
SMPD1P17405 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMPD1P17405 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMPD1P17405 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.95■□□□□ 0.62
SMPD1P17405 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMPD1P17405 BASP1P1-201ENST00000430708 665 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms