Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
COL11A2P13942 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A2P13942 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A2P13942 TOP3BP1-201ENST00000420768 1380 ntBASIC20.72■□□□□ 0.91
COL11A2P13942 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.72■□□□□ 0.91
COL11A2P13942 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.72■□□□□ 0.91
COL11A2P13942 HLA-H-201ENST00000383620 1096 ntBASIC20.72■□□□□ 0.91
COL11A2P13942 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.72■□□□□ 0.91
COL11A2P13942 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A2P13942 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.72■□□□□ 0.91
COL11A2P13942 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A2P13942 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A2P13942 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL11A2P13942 AL355312.1-201ENST00000407115 2176 ntBASIC20.72■□□□□ 0.91
COL11A2P13942 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL11A2P13942 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
COL11A2P13942 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A2P13942 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.71■□□□□ 0.91
COL11A2P13942 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 TP53TG3HP-202ENST00000569755 579 ntBASIC20.71■□□□□ 0.91
COL11A2P13942 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL11A2P13942 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.71■□□□□ 0.91
COL11A2P13942 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL11A2P13942 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL11A2P13942 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.71■□□□□ 0.91
COL11A2P13942 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.7■□□□□ 0.9
COL11A2P13942 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.7■□□□□ 0.9
COL11A2P13942 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.7■□□□□ 0.9
COL11A2P13942 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL11A2P13942 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.7■□□□□ 0.9
COL11A2P13942 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL11A2P13942 AC132938.2-201ENST00000579188 680 ntBASIC20.7■□□□□ 0.9
COL11A2P13942 AL133215.2-201ENST00000609242 977 ntBASIC20.7■□□□□ 0.9
COL11A2P13942 AL591163.1-201ENST00000641757 987 ntBASIC20.7■□□□□ 0.9
COL11A2P13942 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.7■□□□□ 0.9
COL11A2P13942 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.69■□□□□ 0.9
COL11A2P13942 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A2P13942 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL11A2P13942 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 CETN4P-206ENST00000642099 2168 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.69■□□□□ 0.9
COL11A2P13942 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.69■□□□□ 0.9
COL11A2P13942 MIR4492-201ENST00000581627 80 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 AL606495.2-201ENST00000605867 535 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.69■□□□□ 0.9
COL11A2P13942 AC138969.3-201ENST00000546612 1459 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 AC138932.2-201ENST00000548268 1459 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 AC126755.4-201ENST00000549796 1459 ntBASIC20.69■□□□□ 0.9
COL11A2P13942 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms