Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CGB3P0DN86 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CGB3P0DN86 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CGB3P0DN86 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.08□□□□□ -0.16
CGB3P0DN86 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.08□□□□□ -0.16
CGB3P0DN86 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 EMBP1-201ENST00000458200 901 ntBASIC14.08□□□□□ -0.16
CGB3P0DN86 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.08□□□□□ -0.16
CGB3P0DN86 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CGB3P0DN86 AC107918.4-202ENST00000641623 219 ntBASIC14.08□□□□□ -0.16
CGB3P0DN86 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 AC078925.2-201ENST00000624013 1973 ntBASIC14.08□□□□□ -0.16
CGB3P0DN86 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CGB3P0DN86 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CGB3P0DN86 PCDHB17P-201ENST00000539533 2393 ntBASIC14.08□□□□□ -0.16
CGB3P0DN86 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.08□□□□□ -0.16
CGB3P0DN86 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
CGB3P0DN86 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CGB3P0DN86 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CGB3P0DN86 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.07□□□□□ -0.16
CGB3P0DN86 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
CGB3P0DN86 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.07□□□□□ -0.16
CGB3P0DN86 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.07□□□□□ -0.16
CGB3P0DN86 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.07□□□□□ -0.16
CGB3P0DN86 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.07□□□□□ -0.16
CGB3P0DN86 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.07□□□□□ -0.16
CGB3P0DN86 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.07□□□□□ -0.16
CGB3P0DN86 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CGB3P0DN86 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.07□□□□□ -0.16
CGB3P0DN86 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CGB3P0DN86 RNF216P1-203ENST00000404404 2427 ntBASIC14.06□□□□□ -0.16
CGB3P0DN86 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.06□□□□□ -0.16
CGB3P0DN86 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CGB3P0DN86 FLJ38576-201ENST00000623820 2459 ntBASIC14.06□□□□□ -0.16
CGB3P0DN86 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CGB3P0DN86 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CGB3P0DN86 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CGB3P0DN86 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.06□□□□□ -0.16
CGB3P0DN86 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.06□□□□□ -0.16
CGB3P0DN86 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.06□□□□□ -0.16
CGB3P0DN86 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms