Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.82■□□□□ 0.6
CLTAP09496 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.82■□□□□ 0.6
CLTAP09496 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLTAP09496 PGM5P2-202ENST00000637225 1043 ntBASIC18.82■□□□□ 0.6
CLTAP09496 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.82■□□□□ 0.6
CLTAP09496 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLTAP09496 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.82■□□□□ 0.6
CLTAP09496 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLTAP09496 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 ELK2BP-201ENST00000415014 1224 ntBASIC18.81■□□□□ 0.6
CLTAP09496 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.81■□□□□ 0.6
CLTAP09496 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.81■□□□□ 0.6
CLTAP09496 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.81■□□□□ 0.6
CLTAP09496 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.81■□□□□ 0.6
CLTAP09496 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 AL139384.1-201ENST00000612143 3047 ntBASIC18.81■□□□□ 0.6
CLTAP09496 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.81■□□□□ 0.6
CLTAP09496 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLTAP09496 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.8■□□□□ 0.6
CLTAP09496 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.8■□□□□ 0.6
CLTAP09496 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 GPR89P-201ENST00000407924 1495 ntBASIC18.8■□□□□ 0.6
CLTAP09496 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 RPL13AP23-201ENST00000480739 586 ntBASIC18.8■□□□□ 0.6
CLTAP09496 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 AC117500.6-201ENST00000624871 588 ntBASIC18.8■□□□□ 0.6
CLTAP09496 AC005593.1-201ENST00000624894 515 ntBASIC18.8■□□□□ 0.6
CLTAP09496 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CLTAP09496 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLTAP09496 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.8■□□□□ 0.6
CLTAP09496 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.8■□□□□ 0.6
CLTAP09496 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLTAP09496 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLTAP09496 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.79■□□□□ 0.6
CLTAP09496 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLTAP09496 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLTAP09496 AC141586.5-201ENST00000624546 2050 ntBASIC18.79■□□□□ 0.6
CLTAP09496 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.79■□□□□ 0.6
CLTAP09496 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.79■□□□□ 0.6
CLTAP09496 AP000347.1-202ENST00000435868 847 ntBASIC18.79■□□□□ 0.6
CLTAP09496 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.79■□□□□ 0.6
CLTAP09496 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.79■□□□□ 0.6
CLTAP09496 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.79■□□□□ 0.6
CLTAP09496 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms